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Intron Name: Anas_platyrhynchos_platyrhynchos_7_13338190_13341553_F

Intron Information:

Intron Rank:

135286

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

13338190 - 13341553

Intron Length:

3364

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGTCCA

5'SS Class:

strong_major

3'SS Sequence:

TTAATCCTGAAAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TATTAAT

U12 Branch Point Sequence:

TCTCTATTAATC

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

94.4

1.05

0.8

80.7

33.8

Major BPS

91.8

1.04

0.7

90.2

19.3

Major PPT

58.8

0.2

1.2

60.3

40.5

Minor 5ss

34.5

-1.8

2.8

42.4

44.3

Minor BPS

59.9

0.29

1.6

68.42

37.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000022768

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000032009

13337188 - 13425054

87867