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Intron Name: Anas_platyrhynchos_platyrhynchos_7_13405249_13408505_R

Intron Information:

Intron Rank:

134794

Intron Class:

major

Intron Phase:

Intron Coordinates:

13405249 - 13408505

Intron Length:

3257

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAATGCA

5'SS Class:

strong_major

3'SS Sequence:

ATTCTTTTCCCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTGTCAT

U12 Branch Point Sequence:

AACCACTGAAAC

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.8

0.75

0.9

73.5

30.3

Major BPS

84.8

0.86

1.1

85.7

34.9

Major PPT

84.1

0.77

0.8

76.9

36.6

Minor 5ss

26.9

-2.7

32.5

42.3

Minor BPS

45.8

-0.3

1.7

51.47

38.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000019850

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000022937

13404697 - 13409018

4322