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Intron Name: Anas_platyrhynchos_platyrhynchos_7_13454326_13454942_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

13454326 - 13454942

Intron Length:

617

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGCAAG

5'SS Class:

strong_major

3'SS Sequence:

TCTCTGTTTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AATTAAA

U12 Branch Point Sequence:

ACAAATTAAAGT

Flanking Amino Acid:

CVAACRLRNKNQQCESNSHE

Intron Amino Acid Position:

184

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.6

0.93

0.9

77.9

38.6

Major BPS

73.8

0.59

0.9

26.8

Major PPT

85.2

0.79

0.8

79.9

32.1

Minor 5ss

38.7

-1.3

2.8

47.8

47.9

Minor BPS

41.3

-0.5

52.4

42.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000002410

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038141

13454235 - 13457359

3125

ENSAPLT00000020560

13454235 - 13463162

8928

ENSAPLT00000002426

13454235 - 13463162

8928