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Intron Name: Anas_platyrhynchos_platyrhynchos_7_13522215_13525131_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

13522215 - 13525131

Intron Length:

2917

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTAAGAAAC

5'SS Class:

strong_major

3'SS Sequence:

CCTTCTCCCACAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTTTCAC

U12 Branch Point Sequence:

GGTTTCACACTT

Flanking Amino Acid:

LITAIFISYWQKSKKNRYHQ

Intron Amino Acid Position:

177

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.8

0.77

75.1

35.1

Major BPS

72.3

0.55

1.2

77.4

37.4

Major PPT

0.63

0.7

72.1

26.2

Minor 5ss

33.3

-1.9

2.9

35.7

40.8

Minor BPS

-0.3

62.39

41.7

Associated Gene:

Gene:

CD28

Ensembl Gene ID:

ENSAPLG00000001723

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000001791

13522074 - 13533460

11387