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Intron Name: Anas_platyrhynchos_platyrhynchos_7_13617467_13621021_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

13617467 - 13621021

Intron Length:

3555

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTTAGGAAG

5'SS Class:

major

3'SS Sequence:

TTGTCCTTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTGTCAA

U12 Branch Point Sequence:

TCAAAGTTAACT

Flanking Amino Acid:

WLGELDKLTQSLDTDKPVAP

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.7

0.65

1.2

70.7

40.9

Major BPS

75.6

0.64

1.1

77.7

37.1

Major PPT

0.83

0.7

84.9

29.9

Minor 5ss

-2.5

2.8

30.9

42.7

Minor BPS

49.2

0.02

2.3

70.66

45.6

Associated Gene:

Gene:

RAPH1

Ensembl Gene ID:

ENSAPLG00000000860

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034147

13617347 - 13664776

47430

ENSAPLT00000001022

13617347 - 13664776

47430