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Intron Name: Anas_platyrhynchos_platyrhynchos_7_13621128_13621931_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

13621128 - 13621931

Intron Length:

804

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTTTGTTGA

5'SS Class:

major

3'SS Sequence:

TTCTCAATTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTCAA

U12 Branch Point Sequence:

CTCTTCTCAATT

Flanking Amino Acid:

SYRFSMYNLNEALNQGETVD

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

67.2

0.41

1.2

61.5

39.4

Major BPS

85.7

0.89

0.8

85.9

22.5

Major PPT

80.4

0.68

0.8

74.4

33.9

Minor 5ss

42.2

-0.9

2.5

47.5

43.2

Minor BPS

62.9

0.48

1.6

75.15

42.4

Associated Gene:

Gene:

RAPH1

Ensembl Gene ID:

ENSAPLG00000000860

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034147

13617347 - 13664776

47430

ENSAPLT00000001022

13617347 - 13664776

47430