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Intron Name: Anas_platyrhynchos_platyrhynchos_7_13622450_13645447_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

13622450 - 13645447

Intron Length:

22998

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAGTGTCA

5'SS Class:

major

3'SS Sequence:

TGTCTCCCCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTGTAT

U12 Branch Point Sequence:

ATAACTGGAATT

Flanking Amino Acid:

LTSQGQPITEEEQAAKLKAE

Intron Amino Acid Position:

249

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

69.8

0.47

1.1

62.1

Major BPS

71.5

0.53

1.4

71.7

44.6

Major PPT

75.1

0.57

0.8

66.3

35.8

Minor 5ss

35.7

-1.6

3.4

47.9

47.7

Minor BPS

45.8

-0.2

64.8

39.8

Associated Gene:

Gene:

RAPH1

Ensembl Gene ID:

ENSAPLG00000000860

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034147

13617347 - 13664776

47430