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Intron Name: Anas_platyrhynchos_platyrhynchos_7_13631217_13635987_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

13631217 - 13635987

Intron Length:

4771

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCT|GTAAGTTAC

5'SS Class:

major

3'SS Sequence:

CTTTCTGCACAAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTGAC

U12 Branch Point Sequence:

TTCTTTTGACTT

Flanking Amino Acid:

FTEEEAELIPHSYLDRETSL

Intron Amino Acid Position:

274

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.4

0.6

1.1

71.7

34.5

Major BPS

86.5

0.91

0.8

77.4

37.4

Major PPT

61.8

0.27

1.1

61.3

39.2

Minor 5ss

43.4

-0.7

2.8

62.5

42.2

Minor BPS

51.5

0.12

1.7

71.39

40.7

Associated Gene:

Gene:

RAPH1

Ensembl Gene ID:

ENSAPLG00000000860

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000001022

13617347 - 13664776

47430