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Intron Name: Anas_platyrhynchos_platyrhynchos_7_13649710_13651435_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

13649710 - 13651435

Intron Length:

1726

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAATCCTG

5'SS Class:

major

3'SS Sequence:

TTTCTTTTTACAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATTTCAT

U12 Branch Point Sequence:

TTTCTTTTTACA

Flanking Amino Acid:

EKYALFKNPQNYLLGKKETS

Intron Amino Acid Position:

419

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.7

0.65

1.1

65.5

45.9

Major BPS

91.2

1.02

0.7

91.7

20.2

Major PPT

95.3

1.02

0.5

91.2

20.6

Minor 5ss

41.6

-0.9

3.1

56.4

47.8

Minor BPS

63.5

0.42

1.6

76.13

34.5

Associated Gene:

Gene:

RAPH1

Ensembl Gene ID:

ENSAPLG00000000860

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034147

13617347 - 13664776

47430

ENSAPLT00000001022

13617347 - 13664776

47430