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Intron Name: Anas_platyrhynchos_platyrhynchos_7_13654412_13657876_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

13654412 - 13657876

Intron Length:

3465

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAACTTGT

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTTCTGCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TATTAAA

U12 Branch Point Sequence:

TGGGGATTAACA

Flanking Amino Acid:

APTDYCLVLKHPQIQKKSQY

Intron Amino Acid Position:

526

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.9

0.78

1.1

78.8

38.3

Major BPS

82.6

0.81

0.8

82.2

24.5

Major PPT

1.03

0.5

92.7

17.1

Minor 5ss

47.5

-0.2

2.6

67.8

Minor BPS

47.9

-0.1

2.1

61.04

44.8

Associated Gene:

Gene:

RAPH1

Ensembl Gene ID:

ENSAPLG00000000860

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034147

13617347 - 13664776

47430

ENSAPLT00000001022

13617347 - 13664776

47430