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Intron Name: Anas_platyrhynchos_platyrhynchos_7_13657976_13658653_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

13657976 - 13658653

Intron Length:

678

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAACCTCC

5'SS Class:

major

3'SS Sequence:

TCATTTTGCTTAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGTCAT

U12 Branch Point Sequence:

TAGTCGTTACAT

Flanking Amino Acid:

QWINGIRIAKYGKQLYMNYQ

Intron Amino Acid Position:

559

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.5

0.6

1.2

66.7

40.1

Major BPS

84.8

0.86

1.1

85.7

34.9

Major PPT

72.5

0.51

0.9

37.1

Minor 5ss

52.4

0.08

2.4

69.1

41.7

Minor BPS

47.8

-0

2.4

70.21

46.3

Associated Gene:

Gene:

RAPH1

Ensembl Gene ID:

ENSAPLG00000000860

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034147

13617347 - 13664776

47430

ENSAPLT00000001022

13617347 - 13664776

47430