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Intron Name: Anas_platyrhynchos_platyrhynchos_7_13658775_13659371_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

13658775 - 13659371

Intron Length:

597

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAATAATG

5'SS Class:

strong_major

3'SS Sequence:

TTCTTTTAAACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTTTTAA

U12 Branch Point Sequence:

TTTCTTTTAAAC

Flanking Amino Acid:

KSGSSSSSLPESQSNHSNQS

Intron Amino Acid Position:

599

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.3

0.76

77.4

37.4

Major BPS

74.9

0.62

67.3

39.2

Major PPT

79.5

0.66

0.9

77.4

34.7

Minor 5ss

37.2

-1.5

49.1

46.7

Minor BPS

68.8

0.57

1.3

76.65

32.7

Associated Gene:

Gene:

RAPH1

Ensembl Gene ID:

ENSAPLG00000000860

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034147

13617347 - 13664776

47430

ENSAPLT00000001022

13617347 - 13664776

47430