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Intron Name: Anas_platyrhynchos_platyrhynchos_7_13659515_13663132_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

13659515 - 13663132

Intron Length:

3618

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAACAAGA

5'SS Class:

major

3'SS Sequence:

CCCTTCCCCATAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTTTCAC

U12 Branch Point Sequence:

TTTCACTAAAAT

Flanking Amino Acid:

RGTQLEESSKARMEPAGRPF

Intron Amino Acid Position:

647

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.8

0.66

1.1

71.7

40.1

Major BPS

77.7

0.69

30.2

Major PPT

70.2

0.45

0.7

64.6

24.1

Minor 5ss

38.4

-1.3

2.9

49.8

Minor BPS

55.8

0.26

80.16

Associated Gene:

Gene:

RAPH1

Ensembl Gene ID:

ENSAPLG00000000860

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034147

13617347 - 13664776

47430

ENSAPLT00000001022

13617347 - 13664776

47430