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Intron Name: Anas_platyrhynchos_platyrhynchos_7_13700559_13708518_R


Intron Information:

Intron Rank:
3

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
13700559 - 13708518

Intron Length:
7960

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CAA|GTGAGACCT

5'SS Class:
major

3'SS Sequence:
GCGTCTTTTGTAG|A

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TAGTAAA

U12 Branch Point Sequence:
TGTTAGTAAATA

Flanking Amino Acid:
MESSINHISQTVDIHKEKVA

Intron Amino Acid Position:
84

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
75.9
0.61
1
67.9
37.1

Major BPS
67.4
0.43
1.1
67.9
36.3

Major PPT
74.4
0.55
0.9
69.1
37

Minor 5ss
30.9
-2.2
3.2
41.2
38.7

Minor BPS
46.3
-0.2
2.4
64.78
41.9

Associated Gene:

Gene:
ABI2

Ensembl Gene ID:

Chromosome:
7

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

13678546 - 13732370
53825

13678546 - 13732370
53825

13678546 - 13732370
53825