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Intron Name: Anas_platyrhynchos_platyrhynchos_7_13708687_13732252_R


Intron Information:

Intron Rank:
2

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
13708687 - 13732252

Intron Length:
23566

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CAG|GTGCGGGCC

5'SS Class:
major

3'SS Sequence:
TTTCTGCTTTCAG|T

3'SS Class:
strong_PPT

U2 Branch Point Sequence:
CTTTCAT

U12 Branch Point Sequence:
TTTTACTGAATA

Flanking Amino Acid:
AEYCETNYIQSADKQRALEE

Intron Amino Acid Position:
28

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
74.8
0.58
1
63.7
36.4

Major BPS
87.6
0.93
0.9
89.3
26

Major PPT
87.4
0.84
0.7
84.9
30

Minor 5ss
24
-3
3.4
32.8
42.4

Minor BPS
69.6
0.61
1.6
81.62
33.1

Associated Gene:

Gene:
ABI2

Ensembl Gene ID:

Chromosome:
7

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

13678546 - 13732370
53825

13678546 - 13732370
53825

13678546 - 13732370
53825