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Intron Name: Anas_platyrhynchos_platyrhynchos_7_13757974_13760817_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

13757974 - 13760817

Intron Length:

2844

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAT|GTAAGTGCC

5'SS Class:

strong_major

3'SS Sequence:

TACTTGCTTTCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTGTCAC

U12 Branch Point Sequence:

GTTTCCTTTACT

Flanking Amino Acid:

LKQHINPNRISNPFEAILKS

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.1

0.78

33.2

Major BPS

74.9

0.62

1.1

77.4

37.4

Major PPT

80.5

0.69

0.9

77.1

36.8

Minor 5ss

36.4

-1.5

3.2

49.6

39.8

Minor BPS

80.5

1.04

1.5

93.5

34.2

Associated Gene:

Gene:

CYP20A1

Ensembl Gene ID:

ENSAPLG00000015942

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016649

13751016 - 13761462

10447