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Intron Name: Anas_platyrhynchos_platyrhynchos_7_13777786_13778888_R


Intron Information:

Intron Rank:
11

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
13777786 - 13778888

Intron Length:
1103

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
AAG|GTACTTAGC

5'SS Class:
major

3'SS Sequence:
TTGATTTATTCAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TTTTGAT

U12 Branch Point Sequence:
TTATTTTTGATT

Flanking Amino Acid:
TSIEGKTTLKDKNALHLYSV

Intron Amino Acid Position:
423

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
75.8
0.61
1.1
69.2
41.7

Major BPS
96.4
1.15
0.6
85.7
34.9

Major PPT
79.3
0.66
1
77.8
40.5

Minor 5ss
35.1
-1.7
2.9
46.4
41.7

Minor BPS
71.1
0.75
1.1
82.58
32.6

Associated Gene:

Gene:

Ensembl Gene ID:

Chromosome:
7

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

13774087 - 13788556
14470