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Intron Name: Anas_platyrhynchos_platyrhynchos_7_13827576_13827966_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

13827576 - 13827966

Intron Length:

391

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTAAGTGGG

5'SS Class:

strong_major

3'SS Sequence:

GTGGGTTGGAGAG|C

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTTTGAA

U12 Branch Point Sequence:

TCGTTTTGAAAA

Flanking Amino Acid:

PYRNWRQRVAGQEMGPALRS

Intron Amino Acid Position:

172

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.6

0.79

67.1

44.6

Major BPS

87.2

0.92

0.8

77.7

37.1

Major PPT

43.1

-0.3

1.8

41.4

47.3

Minor 5ss

31.6

-2.1

3.1

31.9

42.5

Minor BPS

52.1

0.06

1.5

60.52

39.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000017302

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046182

13827506 - 13851682

24177