Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_7_13835235_13851631_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

13835235 - 13851631

Intron Length:

16397

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGTGTC

5'SS Class:

strong_major

3'SS Sequence:

TTTTCTTTTACAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ACTTAAT

U12 Branch Point Sequence:

TATTACTTAATA

Flanking Amino Acid:

YELWMLYCNKKDPDYLKLWL

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

1.11

0.7

88.7

23.8

Major BPS

78.2

0.7

77.9

32.1

Major PPT

95.6

1.03

0.5

91.4

20.1

Minor 5ss

37.2

-1.4

3.3

45.2

Minor BPS

76.3

0.82

1.4

81.9

32.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000017302

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046182

13827506 - 13851682

24177