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Intron Name: Anas_platyrhynchos_platyrhynchos_7_13877527_13879016_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

13877527 - 13879016

Intron Length:

1490

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGGGCCTT

5'SS Class:

major

3'SS Sequence:

TTTTTCTCACCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TATGAAA

U12 Branch Point Sequence:

TTTTTCTCACCA

Flanking Amino Acid:

FDSSADGHFVSGELMSLRVP

Intron Amino Acid Position:

159

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.2

0.62

68.8

43.8

Major BPS

57.6

0.19

1.3

67.9

36.3

Major PPT

84.3

0.77

0.8

78.9

34.4

Minor 5ss

-1.5

3.5

55.3

48.9

Minor BPS

63.4

0.42

1.8

79.1

37.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000015011

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015640

13875026 - 13879347

4322