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Intron Name: Anas_platyrhynchos_platyrhynchos_7_13946407_13946941_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

13946407 - 13946941

Intron Length:

535

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGGTTC

5'SS Class:

strong_major

3'SS Sequence:

ATTGTCTTCTCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTATGAA

U12 Branch Point Sequence:

GAGTTATGAAAA

Flanking Amino Acid:

FSYNQMVASFSYSPIRLLEV

Intron Amino Acid Position:

1388

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.1

0.88

0.8

79.1

30.7

Major BPS

75.5

0.63

40.9

Major PPT

80.1

0.68

0.8

77.5

36.2

Minor 5ss

35.8

-1.6

3.4

49.2

47.3

Minor BPS

45.6

-0.3

1.7

52.87

38.2

Associated Gene:

Gene:

PIKFYVE

Ensembl Gene ID:

ENSAPLG00000014164

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014835

13903380 - 13959588

56209