Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_7_13956075_13956340_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

13956075 - 13956340

Intron Length:

266

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATGTGTG

5'SS Class:

strong_major

3'SS Sequence:

ATCTTCTCACCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATCTTAC

U12 Branch Point Sequence:

ATCTTCTCACCA

Flanking Amino Acid:

TYITNAVQQKKPTALAKILG

Intron Amino Acid Position:

1899

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.9

0.89

0.9

77.9

36.9

Major BPS

72.7

0.56

0.9

63.4

35.2

Major PPT

74.2

0.54

0.9

67.3

38.5

Minor 5ss

42.4

-0.8

3.1

57.3

47.4

Minor BPS

52.1

0.06

1.8

65.27

41.4

Associated Gene:

Gene:

PIKFYVE

Ensembl Gene ID:

ENSAPLG00000014164

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014835

13903380 - 13959588

56209