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Intron Name: Anas_platyrhynchos_platyrhynchos_7_13969920_13971108_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

13969920 - 13971108

Intron Length:

1189

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAAAAGC

5'SS Class:

strong_major

3'SS Sequence:

TTGTTTTTTAAAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTGTAAT

U12 Branch Point Sequence:

TGTTTTTTAAAG

Flanking Amino Acid:

VKFYPYQGMKKSVLGEYIDS

Intron Amino Acid Position:

241

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.4

0.74

72.3

37.6

Major BPS

84.4

0.85

1.1

34.5

Major PPT

80.3

0.68

82.2

33.3

Minor 5ss

33.2

-1.9

43.7

43.6

Minor BPS

66.7

0.39

1.4

68.86

38.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000028706

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000019986

13969761 - 13976776

7016