Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_7_13987492_13989302_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

13987492 - 13989302

Intron Length:

1811

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTAAGTGAC

5'SS Class:

strong_major

3'SS Sequence:

TACTTTTTGATAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAA

U12 Branch Point Sequence:

TACTTTTTGATA

Flanking Amino Acid:

ESWHFYRYDFGIYDDDPEII

Intron Amino Acid Position:

122

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.89

0.9

77.6

30.7

Major BPS

90.4

0.7

90.2

19.3

Major PPT

74.4

0.55

72.4

37.5

Minor 5ss

33.1

-1.9

3.2

40.3

40.2

Minor BPS

62.2

0.38

1.1

65.63

35.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000013405

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014014

13984675 - 13991584

6910