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Intron Name: Anas_platyrhynchos_platyrhynchos_7_14259930_14262188_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

14259930 - 14262188

Intron Length:

2259

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGCAGA

5'SS Class:

strong_major

3'SS Sequence:

GTGCACGTTACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCCTGAT

U12 Branch Point Sequence:

TGGGCCCTGATG

Flanking Amino Acid:

SQIDPEAAEQIRKRRPTPAS

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.5

0.93

0.9

38.6

Major BPS

66.4

0.41

1.1

56.9

40.5

Major PPT

0.36

57.1

43.1

Minor 5ss

38.7

-1.3

2.8

49.1

46.7

Minor BPS

47.1

-0.3

1.8

51.64

43.3

Associated Gene:

Gene:

PPP1R1C

Ensembl Gene ID:

ENSAPLG00000028661

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028956

14237266 - 14262269

25004