Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_7_14291801_14295955_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

14291801 - 14295955

Intron Length:

4155

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAA|GTAGCCTGG

5'SS Class:

weak_major

3'SS Sequence:

TTAAACAGATCAG|C

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTTTAAA

U12 Branch Point Sequence:

TTTGTTTTAAAC

Flanking Amino Acid:

FTTELLRTASQHSD

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

53.6

0.09

1.3

45.2

45.6

Major BPS

90.4

0.7

90.2

19.3

Major PPT

55.8

0.13

1.1

53.1

45.2

Minor 5ss

49.1

-0.1

2.9

63.5

46.2

Minor BPS

65.8

0.48

1.5

74.65

36.2

Associated Gene:

Gene:

ITPRID2

Ensembl Gene ID:

ENSAPLG00000012488

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047649

14274134 - 14295967

21834