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Intron Name: Anas_platyrhynchos_platyrhynchos_7_14662577_14664345_R


Intron Information:

Intron Rank:
4

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
14662577 - 14664345

Intron Length:
1769

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
AAG|GTAAGGGTA

5'SS Class:
strong_major

3'SS Sequence:
GCTGCAATTCTAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
CACTGAA

U12 Branch Point Sequence:
TGTGCTGCAATT

Flanking Amino Acid:
SSDYPFKPPKVTFRTRIYHC

Intron Amino Acid Position:
127

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
91.2
0.97
0.8
82.2
30.9

Major BPS
62
0.3
1
53
34.1

Major PPT
62.7
0.29
1
52
41.8

Minor 5ss
32.8
-2
3.7
46.2
49.1

Minor BPS
46.2
-0.2
2.2
68.3
43.3

Associated Gene:

Gene:
UBE2E3

Ensembl Gene ID:

Chromosome:
7

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

14660130 - 14719110
58981