Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_7_1478804_1480110_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1478804 - 1480110

Intron Length:

1307

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCA|GTATGGGTA

5'SS Class:

major

3'SS Sequence:

CCTTCTGCCAAAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGTGAA

U12 Branch Point Sequence:

ATATGTTTACTC

Flanking Amino Acid:

LGRTHLCDGSISRSNGPRPS

Intron Amino Acid Position:

1029

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

63.6

0.32

1.1

59.8

39.1

Major BPS

72.1

0.55

1.2

63.4

44.3

Major PPT

62.3

0.28

62.4

32.3

Minor 5ss

41.1

-1

3.6

59.9

45.9

Minor BPS

48.6

-0.1

60.85

39.2

Associated Gene:

Gene:

ANKRD44

Ensembl Gene ID:

ENSAPLG00000002803

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028198

1355915 - 1480169

124255