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Intron Name: Anas_platyrhynchos_platyrhynchos_7_1483924_1487307_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1483924 - 1487307

Intron Length:

3384

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTGAGCCGG

5'SS Class:

major

3'SS Sequence:

TCTTTTGCAACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTGAT

U12 Branch Point Sequence:

TCTTTTGCAACA

Flanking Amino Acid:

TYMFEYPEYLKIKLPKKTAR

Intron Amino Acid Position:

124

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.2

0.55

52.3

46.1

Major BPS

96.4

1.15

0.6

85.7

34.9

Major PPT

77.1

0.61

0.9

73.4

35.9

Minor 5ss

-2.1

35.4

42.3

Minor BPS

48.6

-0.1

2.2

66.33

40.9

Associated Gene:

Gene:

PGAP1

Ensembl Gene ID:

ENSAPLG00000001884

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002050

1483555 - 1514174

30620