Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_7_148670_154245_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

148670 - 154245

Intron Length:

5576

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAGGACAC

5'SS Class:

major

3'SS Sequence:

TGCCTTTTCACAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTATTAC

U12 Branch Point Sequence:

AGTTTATTACCC

Flanking Amino Acid:

YKVIQDPNNELLEPVCHQLF

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.8

0.7

40.1

Major BPS

74.8

0.62

1.1

40.5

Major PPT

80.1

0.68

0.8

33.4

Minor 5ss

30.9

-2.2

3.3

41.2

45.5

Minor BPS

52.7

0.06

1.9

66.42

38.8

Associated Gene:

Gene:

FAM126B

Ensembl Gene ID:

ENSAPLG00000015610

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036696

122670 - 198917

76248

ENSAPLT00000016176

122670 - 198917

76248