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Intron Name: Anas_platyrhynchos_platyrhynchos_7_1487462_1491140_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1487462 - 1491140

Intron Length:

3679

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGCATT

5'SS Class:

strong_major

3'SS Sequence:

TGATTTTTCCTAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGTGAT

U12 Branch Point Sequence:

CCCTGCTTAATT

Flanking Amino Acid:

LPGNAGSYKQVRSLGSIALR

Intron Amino Acid Position:

175

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

93.2

1.02

0.8

90.9

28.7

Major BPS

81.2

0.78

1.1

71.4

45.1

Major PPT

76.1

0.59

0.9

69.6

41.4

Minor 5ss

45.3

-0.5

2.9

45.2

Minor BPS

0.39

1.9

70.75

46.9

Associated Gene:

Gene:

PGAP1

Ensembl Gene ID:

ENSAPLG00000001884

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002050

1483555 - 1514174

30620