Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_7_14917864_14935546_F

Intron Information:

Intron Rank:

142040

Intron Class:

major

Intron Phase:

Intron Coordinates:

14917864 - 14935546

Intron Length:

17683

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTCTGGCTC

5'SS Class:

major

3'SS Sequence:

TTCTATAAAGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTTAAT

U12 Branch Point Sequence:

TGTTATTTAATT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

66.4

0.39

1.3

60.4

44.3

Major BPS

90.7

1.01

0.7

19.9

Major PPT

67.8

0.4

64.2

40.3

Minor 5ss

36.8

-1.5

3.3

50.5

46.1

Minor BPS

72.9

0.8

1.4

85.65

34.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000026457

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046195

14916961 - 14939468

22508