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Intron Name: Anas_platyrhynchos_platyrhynchos_7_1491971_1493069_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1491971 - 1493069

Intron Length:

1099

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAAATAAA

5'SS Class:

strong_major

3'SS Sequence:

ATGTATTTTATAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TTGATTTTAATG

Flanking Amino Acid:

PVMPLDKYITDFYTAVSNHW

Intron Amino Acid Position:

291

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.6

0.72

0.9

78.3

30.5

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

75.5

0.57

0.9

69.6

40.8

Minor 5ss

34.5

-1.8

2.8

38.6

41.7

Minor BPS

62.5

0.25

1.4

62.98

39.9

Associated Gene:

Gene:

PGAP1

Ensembl Gene ID:

ENSAPLG00000001884

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002050

1483555 - 1514174

30620