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Intron Name: Anas_platyrhynchos_platyrhynchos_7_1493231_1494737_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1493231 - 1494737

Intron Length:

1507

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTAAAAAAC

5'SS Class:

major

3'SS Sequence:

CTTCTCCAAACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTTAAT

U12 Branch Point Sequence:

AAAATCTTAATT

Flanking Amino Acid:

SQQDSALSVVSSAVPRAWAS

Intron Amino Acid Position:

345

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.1

0.59

70.2

33.7

Major BPS

0.92

0.9

86.2

29.1

Major PPT

70.8

0.47

0.9

66.6

33.3

Minor 5ss

33.3

-1.9

40.2

40.1

Minor BPS

66.1

0.58

1.2

73.17

37.3

Associated Gene:

Gene:

PGAP1

Ensembl Gene ID:

ENSAPLG00000001884

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002050

1483555 - 1514174

30620