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Intron Name: Anas_platyrhynchos_platyrhynchos_7_1495027_1496413_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1495027 - 1496413

Intron Length:

1387

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTTTGTATA

5'SS Class:

major

3'SS Sequence:

TTGTTTTGTTAAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TAAAAAT

U12 Branch Point Sequence:

TAAAAATTGACC

Flanking Amino Acid:

FDLIDENTRQITEDPKKRMS

Intron Amino Acid Position:

385

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.6

0.67

1.1

80.9

32.8

Major BPS

62.8

0.32

1.1

67.9

34.4

Major PPT

73.3

0.52

1.1

79.2

38.4

Minor 5ss

41.8

-0.9

2.5

51.7

44.8

Minor BPS

47.6

-0.2

1.8

59.02

39.1

Associated Gene:

Gene:

PGAP1

Ensembl Gene ID:

ENSAPLG00000001884

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002050

1483555 - 1514174

30620