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Intron Name: Anas_platyrhynchos_platyrhynchos_7_14957868_14965865_F


Intron Information:

Intron Rank:
1

Intron Class:
major

Intron Phase:
2

Intron Coordinates:
14957868 - 14965865

Intron Length:
7998

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
GAG|GTAAGGGCC

5'SS Class:
strong_major

3'SS Sequence:
ATTCTTATCACAG|C

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TTCTTAT

U12 Branch Point Sequence:
TTTTACTTTATT

Flanking Amino Acid:
VRSDGKNVVLSLCVQDAVSL

Intron Amino Acid Position:
268

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
88.8
0.91
0.9
77.9
31.9

Major BPS
91.4
1.03
0.7
79.9
34.9

Major PPT
79.1
0.65
0.8
73.4
35.1

Minor 5ss
30.5
-2.2
3.5
41.8
45.1

Minor BPS
69
0.68
1.8
89.22
35.1

Associated Gene:

Gene:
THSD7B

Ensembl Gene ID:

Chromosome:
7

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

14956985 - 15160804
203820

14956985 - 15160804
203820