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Intron Name: Anas_platyrhynchos_platyrhynchos_7_14966118_14973193_F


Intron Information:

Intron Rank:
2

Intron Class:
major

Intron Phase:
2

Intron Coordinates:
14966118 - 14973193

Intron Length:
7076

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CAG|GTACCTGCG

5'SS Class:
major

3'SS Sequence:
CTTATTTCCAAAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
CTCTTAT

U12 Branch Point Sequence:
TCTCTCTTATTT

Flanking Amino Acid:
GGRELLQPCPRFSWRTSEWK

Intron Amino Acid Position:
352

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
70.8
0.49
1.2
60.8
44.2

Major BPS
79.1
0.72
1
69.3
38.4

Major PPT
69.7
0.44
1
70.6
33.8

Minor 5ss
37.5
-1.4
3.3
50.5
46

Minor BPS
61.9
0.45
1.6
76.56
40.7

Associated Gene:

Gene:
THSD7B

Ensembl Gene ID:

Chromosome:
7

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

14956985 - 15160804
203820

14956985 - 15160804
203820