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Intron Name: Anas_platyrhynchos_platyrhynchos_7_14973364_14984775_F


Intron Information:

Intron Rank:
3

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
14973364 - 14984775

Intron Length:
11412

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
AAG|GTATGTGCA

5'SS Class:
strong_major

3'SS Sequence:
ATTTTCTCCTTAG|T

3'SS Class:
major_PPT

U2 Branch Point Sequence:
CTTTCAT

U12 Branch Point Sequence:
TTTTCTTTCATT

Flanking Amino Acid:
VEVEMHRLKEVSRPVDGKFC

Intron Amino Acid Position:
409

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
87.5
0.88
0.9
76.8
31.8

Major BPS
87.6
0.93
0.9
89.3
26

Major PPT
79.5
0.66
0.7
78.5
29.6

Minor 5ss
39.1
-1.2
3
50.2
46.2

Minor BPS
73.9
0.83
1.6
91.31
32.6

Associated Gene:

Gene:
THSD7B

Ensembl Gene ID:

Chromosome:
7

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

14956985 - 15160804
203820

14956985 - 15160804
203820