Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_7_14984932_14986633_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

14984932 - 14986633

Intron Length:

1702

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGGGCT

5'SS Class:

strong_major

3'SS Sequence:

TTCTATTTTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AGTTAAT

U12 Branch Point Sequence:

GTCCAGTTAATT

Flanking Amino Acid:

ENCQDRQGRRGFKMRQRHVI

Intron Amino Acid Position:

461

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.2

0.95

0.8

79.6

32.5

Major BPS

75.6

0.64

1.1

75.7

36.5

Major PPT

0.85

0.8

80.5

36.8

Minor 5ss

31.9

-2.1

3.6

47.6

Minor BPS

47.7

-0

2.2

67.08

43.6

Associated Gene:

Gene:

THSD7B

Ensembl Gene ID:

ENSAPLG00000002773

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024444

14956985 - 15160804

203820

ENSAPLT00000002818

14956985 - 15160804

203820