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Intron Name: Anas_platyrhynchos_platyrhynchos_7_1502728_1503036_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1502728 - 1503036

Intron Length:

309

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTAAGTACA

5'SS Class:

strong_major

3'SS Sequence:

GCATCCTTTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAA

U12 Branch Point Sequence:

TTTTATATAATA

Flanking Amino Acid:

QLPVTNLFSFGLSSSKILLN

Intron Amino Acid Position:

552

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.2

0.93

0.8

82.4

29.8

Major BPS

90.4

0.7

90.2

19.3

Major PPT

75.9

0.58

0.9

69.1

36.7

Minor 5ss

36.2

-1.6

2.6

40.7

39.2

Minor BPS

61.4

0.35

1.7

77.21

33.4

Associated Gene:

Gene:

PGAP1

Ensembl Gene ID:

ENSAPLG00000001884

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002050

1483555 - 1514174

30620