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Intron Name: Anas_platyrhynchos_platyrhynchos_7_1503111_1503186_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1503111 - 1503186

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTAAGAATA

5'SS Class:

strong_major

3'SS Sequence:

TTATACGTTTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TTTTTTTTATAC

Flanking Amino Acid:

YNVQLQHFNQVYQAFRIYIE

Intron Amino Acid Position:

577

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.9

0.8

0.9

83.6

27.5

Major BPS

96.5

1.15

0.6

34.2

Major PPT

73.2

0.52

0.9

70.4

40.7

Minor 5ss

38.8

-1.3

3.1

49.9

40.5

Minor BPS

0.36

1.6

74.81

35.9

Associated Gene:

Gene:

PGAP1

Ensembl Gene ID:

ENSAPLG00000001884

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002050

1483555 - 1514174

30620