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Intron Name: Anas_platyrhynchos_platyrhynchos_7_1503239_1504068_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1503239 - 1504068

Intron Length:

830

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAATATG

5'SS Class:

strong_major

3'SS Sequence:

TCTTCCTTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

GTATTTTTAATT

Flanking Amino Acid:

YIESHCQSPNEKTSVYRLHI

Intron Amino Acid Position:

594

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.2

0.71

76.9

38.1

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

90.2

0.9

0.6

88.3

21.4

Minor 5ss

38.8

-1.3

2.9

47.7

42.4

Minor BPS

73.2

0.81

1.1

80.88

34.9

Associated Gene:

Gene:

PGAP1

Ensembl Gene ID:

ENSAPLG00000001884

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002050

1483555 - 1514174

30620