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Intron Name: Anas_platyrhynchos_platyrhynchos_7_1504133_1505096_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1504133 - 1505096

Intron Length:

964

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAA|GTAAGGACT

5'SS Class:

strong_major

3'SS Sequence:

GTTGCTCTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGATTAT

U12 Branch Point Sequence:

TACCAGTTAAGT

Flanking Amino Acid:

WSHEDSVTVAKVPSSSEISA

Intron Amino Acid Position:

615

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.6

0.74

78.9

34.8

Major BPS

69.6

0.49

1.2

60.1

46.3

Major PPT

81.1

0.7

0.9

77.4

36.9

Minor 5ss

36.6

-1.5

3.3

50.4

39.9

Minor BPS

44.2

-0.3

2.4

63.46

46.2

Associated Gene:

Gene:

PGAP1

Ensembl Gene ID:

ENSAPLG00000001884

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002050

1483555 - 1514174

30620