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Intron Name: Anas_platyrhynchos_platyrhynchos_7_1505206_1505592_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1505206 - 1505592

Intron Length:

387

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAA|GTGAGTAAC

5'SS Class:

strong_major

3'SS Sequence:

AATTTTTATGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

AAAATCTTAATT

Flanking Amino Acid:

IYSSSDCQYEVILKTSFLQI

Intron Amino Acid Position:

652

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.9

0.77

0.9

80.3

26.9

Major BPS

96.5

1.15

0.6

34.2

Major PPT

79.4

0.66

0.9

74.5

39.5

Minor 5ss

32.3

-2

2.7

33.9

Minor BPS

66.1

0.58

1.2

73.17

37.3

Associated Gene:

Gene:

PGAP1

Ensembl Gene ID:

ENSAPLG00000001884

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002050

1483555 - 1514174

30620