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Intron Name: Anas_platyrhynchos_platyrhynchos_7_15063738_15068275_F


Intron Information:

Intron Rank:
11

Intron Class:
major-like

Intron Phase:
1

Intron Coordinates:
15063738 - 15068275

Intron Length:
4538

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CAG|GTATAATCT

5'SS Class:
major

3'SS Sequence:
CTGGTTGGAACAG|G

3'SS Class:
degenerate_major

U2 Branch Point Sequence:
ATGTTAA

U12 Branch Point Sequence:
GTTAAGCTAACG

Flanking Amino Acid:
STKTRRRSLTGRSRKRDKCQ

Intron Amino Acid Position:
851

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
74.8
0.58
1
70.2
34.5

Major BPS
63.3
0.33
1.2
55.4
41.7

Major PPT
58.5
0.19
1.1
53.6
44.9

Minor 5ss
46
-0.4
2.9
66
45.1

Minor BPS
42.4
-0.7
2.4
55.08
45.2

Associated Gene:

Gene:
THSD7B

Ensembl Gene ID:

Chromosome:
7

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

14956985 - 15160804
203820