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Intron Name: Anas_platyrhynchos_platyrhynchos_7_1507598_1507804_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1507598 - 1507804

Intron Length:

207

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GGG|GTAAGTTTG

5'SS Class:

strong_major

3'SS Sequence:

ATGTTTTTGGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTTTCAT

U12 Branch Point Sequence:

TCATAAGTAACA

Flanking Amino Acid:

PIISIVVFLQGFNWFREIWD

Intron Amino Acid Position:

726

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.1

0.87

0.9

78.8

38.3

Major BPS

87.6

0.93

0.9

89.3

Major PPT

76.1

0.59

73.4

41.3

Minor 5ss

43.4

-0.7

2.8

46.2

Minor BPS

-0.3

2.3

62.46

43.2

Associated Gene:

Gene:

PGAP1

Ensembl Gene ID:

ENSAPLG00000001884

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002050

1483555 - 1514174

30620