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Intron Name: Anas_platyrhynchos_platyrhynchos_7_1508003_1509904_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1508003 - 1509904

Intron Length:

1902

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTAAAACAA

5'SS Class:

strong_major

3'SS Sequence:

GTTTGTTTTTAAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTATAAT

U12 Branch Point Sequence:

TTTGTTTTTAAG

Flanking Amino Acid:

VFSTLWLILIRPTVLQKDNK

Intron Amino Acid Position:

792

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.8

0.73

70.2

35.7

Major BPS

70.1

0.5

1.3

72.3

40.4

Major PPT

75.6

0.58

1.1

79.2

38.4

Minor 5ss

30.6

-2.2

3.1

38.6

46.4

Minor BPS

48.1

-0.2

1.9

59.36

42.7

Associated Gene:

Gene:

PGAP1

Ensembl Gene ID:

ENSAPLG00000001884

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002050

1483555 - 1514174

30620