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Intron Name: Anas_platyrhynchos_platyrhynchos_7_1510041_1511203_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1510041 - 1511203

Intron Length:

1163

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTACTGAAA

5'SS Class:

major

3'SS Sequence:

GTCTGTCTTACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGTTAAA

U12 Branch Point Sequence:

CATTTGTTAAAA

Flanking Amino Acid:

FVIYLQYLFKVIKLHVNVGA

Intron Amino Acid Position:

838

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.6

0.51

1.1

67.9

38.7

Major BPS

75.2

0.63

1.1

75.9

36.3

Major PPT

79.3

0.66

0.9

72.1

Minor 5ss

30.6

-2.2

3.3

39.7

45.9

Minor BPS

0.03

2.1

65.11

41.3

Associated Gene:

Gene:

PGAP1

Ensembl Gene ID:

ENSAPLG00000001884

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002050

1483555 - 1514174

30620