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Intron Name: Anas_platyrhynchos_platyrhynchos_7_1511255_1512507_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1511255 - 1512507

Intron Length:

1253

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GGG|GTGAGTATT

5'SS Class:

strong_major

3'SS Sequence:

CTTTTATCTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTTAT

U12 Branch Point Sequence:

TGTCTTTTATCT

Flanking Amino Acid:

VGAEKNMLNGDPDCSKETSQ

Intron Amino Acid Position:

855

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.85

0.9

86.9

30.1

Major BPS

91.4

1.03

0.7

79.9

34.9

Major PPT

87.6

0.85

0.7

85.5

27.9

Minor 5ss

35.8

-1.6

2.9

43.1

43.9

Minor BPS

61.1

0.43

1.6

77.62

38.8

Associated Gene:

Gene:

PGAP1

Ensembl Gene ID:

ENSAPLG00000001884

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002050

1483555 - 1514174

30620