Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_7_15156538_15159363_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

15156538 - 15159363

Intron Length:

2826

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAAAAAC

5'SS Class:

major

3'SS Sequence:

AATCTTCCAACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCCCAA

U12 Branch Point Sequence:

TTCTTCCCAATC

Flanking Amino Acid:

KGWSIQPFNPDGKLKMWVYG

Intron Amino Acid Position:

1504

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.7

0.68

0.9

73.6

30.2

Major BPS

63.1

0.33

1.2

72.7

34.3

Major PPT

69.1

0.43

63.4

37.3

Minor 5ss

27.7

-2.6

2.9

33.7

41.9

Minor BPS

51.1

0.01

1.9

66.7

39.3

Associated Gene:

Gene:

THSD7B

Ensembl Gene ID:

ENSAPLG00000002773

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024444

14956985 - 15160804

203820

ENSAPLT00000002818

14956985 - 15160804

203820